DATA UPLOAD PORTAL


Expression and mutation data can be uploaded and visualised using our tool to enhance your analysis.

Generate your data in the format described below.

My data files...

SELECT ORGANISM

Either human, mouse and fly data are accepted

UPLOAD DATA

Submit EXPRESSION (example) and MUTATION (optional - example) data in defined formats. Choose the column number of your file that corresponds to each column below. You could upload multiple files at the same time, or a single file that contains all the samples. Fields marked with * have to be present in your file.

Expression file:
Type of Identifier* Column number of: Sample ID* Gene Identifier* Expression of Wild type/Control Expression of Mutant/Tumor Log2 Fold Change* p-value
Mutation file (optional):
Type of Identifier* Column number of: Sample ID* Gene Identifier* Chromosome* Position* Reference Allele* Alternative Allele* Effect Consequence

Expression File Format

Only comma-separated-values (.csv) and tab-delimited (.txt) files are accepted. Below is an example for the expression file in table format.
Or download a sample file here.
(Tab-delimited file containing a single human sample with HGNC symbol as Gene Identifier)

Sample ID+ Gene Identifier^ Control Mutant Log2Fold* p-value
sample1 MT-CO2 5.14185 0.525591 -3.29027 0.04165
sample1 EPHB2 21.6398 77.9794 1.84941 0.03615
sample1 CD52 113.979 24.01 -2.24706 0.14155
sample1 MFSD2A 2.671 16.7198 2.64611 0.0318

Note:
+ Sample IDs have to be present if you have chosen to include them at the upload portal above
^ The type of gene identifier could be chosen at the upload portal above
* Fields marked with * have to be present in your file

Mutation File Format

Only comma-separated-values (.csv) and tab-delimited (.txt) files are accepted. Below is an example for the mutation file in table format.
Or download a sample file here.
(Tab-delimited file containing a single human sample with HGNC symbol as Gene Identifier)

Sample ID+ Gene Identifier^ Chromosome* Position* Reference Allele* Alternative Allele* Mutation Type (Effect) Consequence
sample1 MT-CO2 M 8159 T C SNP Missense
sample1 AGO1 1 36391661 TGAA T DEL 3'UTR
sample1 ITIH1 3 52825585 T C SNP Silent
sample1 GPR35 2 241566012 G A SNP Intron

Note:
+ Sample IDs have to be present if you have chosen to include them at the upload portal above
^ The type of gene identifier could be chosen at the upload portal above
* Fields marked with * have to be present in your file